Willow Creek Fish Passage Project – Bridge #2

Project at-a-glance

Project Title: Willow Creek Fish Passage Project

Project Applicant: California State Parks

Partners: NOAA Restoration Center, California State Parks, Stewards of the Coast and Redwoods, California Department of Fish and Wildlife, Sonoma County Water Agency, Sonoma County Department of Public Works, Trout Unlimited, Mendocino Redwoods Company, Prunuske Chatham, Inc.

Project funding provided by: NOAA, California Department of Fish and Wildlife, Trout Unlimited, Sonoma County Water Agency

Groups Conducting Monitoring: Russian River Coho Monitoring Program

Project Location: Willow Creek, a tributary to the lower Russian River in the estuary near

Background

Willow Creek is a tributary to the lower Russian River in the estuary near Jenner in Sonoma, County. Lower Willow Creek has been subject to agricultural practices since 1850, degrading a large portion of its historic wetland habitat, including clearing of the wetlands for grazing and dredging a ditch to reroute the creek. Since California State Parks took ownership of the property in 1996, they abandoned the practice of dredging and phased out grazing operations, which led to significant regrowth of the wetland habitat. The stream channel migrated back to the southern part of the valley and six 3-foot culverts were installed to pass streamflow under the road. These culverts quickly plugged with debris, and fish were forced to swim over the road during high flows, significantly compromising fish passage.

The Willow Creek Fish Passage Project restored fish passage options for adult and juvenile coho salmon (Oncorhynchus kisutch) and steelhead (Oncorhynchus mykiss) via the construction of a 43-foot clear span bridge in 2011. Project leaders removed six debris-plugged culverts and installed a 43-foot clear-span bridge to reconnect the wetlands, reducing flooding and providing coho salmon and steelhead trout with access to seven miles of high quality spawning, rearing and winter refugia habitat. Restoring access to the Willow Creek watershed was intended to influence salmon production in the entire Russian River watershed.

Monitoring Timeline

Baseline fisheries monitoring occurred in the winter prior to construction and during the summer of construction. Fisheries monitoring has occurred on a regular basis since bridge construction in 2011.

Monitoring Purpose

A comprehensive fish monitoring program was implemented to assess the effectiveness of the installation of the new bridge to re-establish fish passage and colonization of the watershed as well as overall effectiveness of coho salmon reintroductions within the watershed and the larger Russian River basin as a result of the Russian River Coho Salmon Captive Broodstock Program.

Monitoring Methods

Spawner/red surveys in winter documented the presence of spawning salmonids to determine spatial spawning distribution within the watershed. Data collected included survey reach and team, weather conditions, stream visibility, and fish and red observations. Juvenile presence/absence survey occurred in late-July through September and documented successful spawning through the presence of rearing juvenile salmonids, density of fish, and spatial distribution in the watershed. A downstream migrant trap was installed and operated to estimate the number and migration timing of smolts migrating out of Willow Creek in the spring, and to estimate overwinter growth of juvenile hatchery coho salmon released in the fall. PIT tag antennas and transceivers were installed and operated in Willow Creek to document movement patterns, survival and abundance of PIT-tagged coho salmon released into the watershed as part of the broodstock program.

Monitoring Results

Table 1. Summary of spawning and snorkel survey observations.

Adult Spawner/Redd Surveys 2011 2012 2013
Number of surveys 3 5 8
Adult salmonids 0 4 3
Redds (complete) 0 1 1
Redds (partial or under construction) 0 2 1
Salmonid jacks 0 8 1
Juvenile Presence/ Absence Surveys 2011 2012 2013
Number of pools surveyed (above third bridge) 63 119 115
Frequency of pools sampled Random Every third pool Every third pool
Coho salmon yoy 0 0 221
Coho salmon parr 0 1 7
Steelhead yoy 99 424 100
Steelhead parr/resident 53 343 22
Chinook salmon parr 0 0 2
Summary Statistics 2011 2012 2013
Average number of steelhead yoy observed per pool 1.43 3.56 0.87
Range of steelhead yoy observed per pool 0-10 0-43 0-10
Average number of coho salmon yoy observed per pool 1.92
Range of coho salmon yoy observed per pool 0-26

Table 2. Number of individuals captured in Willow Creek downstream migrant trap during spring 2012 and 2013.

5/4/2012-6/14/2012 3/7/2013-6/14/2013
Wild coho salmon smolts 0 12
Hatchery coho smolts 864 3,385
coho smolts unknown origin 0 8
Hatchery steelhead adults 0 1
Steelhead smolts 5 25
Steelhead yoy/parr 26 142
Sculpin sp. 339 4,206
Threespine stickleback 383 268
Sacramento sucker 1 24
Sacramento pikeminnow 0 219
California roach 0 1
California red‐legged frog 1 1
California giant salamander 0 1
Rough skinned newt 0 3

Table 3: Spawner survey counts 2011-2017

2011-12 2012-13 2013-14 2014-15 2015-16 2016-17
Number of surveys 3 5 8 16 20 26
Adult coho observed 4 0 32 16 9 25
Adult Steelhead Observed 3 4 3 11 0 0
Unidentified Adult Salmonids Observed 3 0 1 3 0 2
Redds (coho) 0 0 7 5 11 8
Redds (unknown) n/a n/a n/a 2 8 2
Redds (steelhead) n/a n/a n/a 9 4 1

Table 4: Juvenile Presence/Absence Surveys 2012-2017

2012 2013 2014 2015 2016 2017
Number of pools surveyed (above 3rd bridge) 63 119 115 91 117 122
Frequency of pools sampled Random Every 3rd pool Every 3rd pool Every 3rd pool Every 2nd poool Every 2nd pool
Coho salmon yoy 0 0 221 1139 8 575
Coho salmon parr 0 1 7 119 9 54
Steelhead yoy 99 424 100 72 185 249
Steelhead parr/resident 53 343 22 72 18 26
Chinook salmon parr 0 0 2 0 0 0

Table 5: Downstream Migrant Trap Counts 2012-2017

2012 2013 2014 2015 2016 2017
Wild coho salmon smolts 0 12 331 20 429 43
Hatchery coho smolts 863 3,385 583 680 1,579 1684
Coho smolts unknown origin 1 8 2 7 22 2
Steelhead smolts 5 25 11 22 8 5
Steelhead yoy/parr 26 142 866 462 603 77